commit 66159d9fce0129116e82e74cf3eb1d9e048b253d
parent ab1076e00d6a92120e46d4a0085911b4425a0d60
Author: Étienne Simon <esimon@esimon.eu>
Date: Tue, 5 May 2015 13:10:45 -0400
Remove enums from hdf5
Diffstat:
1 file changed, 9 insertions(+), 13 deletions(-)
diff --git a/convert_data.py b/convert_data.py
@@ -9,8 +9,6 @@ stands_size = 63 # `wc -l metaData_taxistandsID_name_GPSlocation.csv` - 1
taxi_id_size = 448 # `cut -d, -f 5 train.csv test.csv | sort -u | wc -l` - 1
origin_call_size = 57124 # `cut -d, -f 3 train.csv test.csv | sort -u | wc -l` - 3 # Minus 3 to ignore "NA", "" and the header
-Call_type = h5py.special_dtype(enum=(numpy.int8, {'CENTRAL': 0, 'STAND': 1, 'STREET': 2}))
-Day_type = h5py.special_dtype(enum=(numpy.int8, {'NORMAL': 0, 'HOLYDAY': 1, 'HOLYDAY_EVE': 2}))
Polyline = h5py.special_dtype(vlen=theano.config.floatX)
taxi_id_dict = {}
@@ -52,12 +50,12 @@ def read_taxis(input_directory, h5file, dataset):
print >> sys.stderr, 'read %s: begin' % dataset
size=globals()['%s_size'%dataset]
trip_id = numpy.empty(shape=(size,), dtype='S19')
- call_type = numpy.empty(shape=(size,), dtype=Call_type)
- origin_call = numpy.empty(shape=(size,), dtype=numpy.int32)
- origin_stand = numpy.empty(shape=(size,), dtype=numpy.int8)
- taxi_id = numpy.empty(shape=(size,), dtype=numpy.int16)
- timestamp = numpy.empty(shape=(size,), dtype=numpy.int32)
- day_type = numpy.empty(shape=(size,), dtype=Day_type)
+ call_type = numpy.empty(shape=(size,), dtype=numpy.uint8)
+ origin_call = numpy.empty(shape=(size,), dtype=numpy.uint32)
+ origin_stand = numpy.empty(shape=(size,), dtype=numpy.uint8)
+ taxi_id = numpy.empty(shape=(size,), dtype=numpy.uint16)
+ timestamp = numpy.empty(shape=(size,), dtype=numpy.uint32)
+ day_type = numpy.empty(shape=(size,), dtype=numpy.uint8)
missing_data = numpy.empty(shape=(size,), dtype=numpy.bool)
latitude = numpy.empty(shape=(size,), dtype=Polyline)
longitude = numpy.empty(shape=(size,), dtype=Polyline)
@@ -88,12 +86,12 @@ def read_taxis(input_directory, h5file, dataset):
return splits
def unique(h5file):
- unique_taxi_id = numpy.empty(shape=(taxi_id_size,), dtype=numpy.int32)
+ unique_taxi_id = numpy.empty(shape=(taxi_id_size,), dtype=numpy.uint32)
assert len(taxi_id_dict) == taxi_id_size
for k, v in taxi_id_dict.items():
unique_taxi_id[v] = k
- unique_origin_call = numpy.empty(shape=(origin_call_size+1,), dtype=numpy.int32)
+ unique_origin_call = numpy.empty(shape=(origin_call_size+1,), dtype=numpy.uint32)
assert len(origin_call_dict) == origin_call_size+1
for k, v in origin_call_dict.items():
unique_origin_call[v] = k
@@ -112,12 +110,10 @@ def convert(input_directory, save_path):
fill_hdf5_file(h5file, split)
- for name in ['stands_name', 'stands_latitude', 'stands_longitude']:
+ for name in ['stands_name', 'stands_latitude', 'stands_longitude', 'unique_taxi_id', 'unique_origin_call']:
h5file[name].dims[0].label = 'index'
for name in ['trip_id', 'call_type', 'origin_call', 'origin_stand', 'taxi_id', 'timestamp', 'day_type', 'missing_data', 'latitude', 'longitude']:
h5file[name].dims[0].label = 'batch'
- h5file['unique_taxi_id'].dims[0].label = 'unormalized taxi_id'
- h5file['unique_origin_call'].dims[0].label = 'unormalized origin_call'
h5file.flush()
h5file.close()